Transforming XML file: NeuroMLFiles/Examples/ChannelML/InhomogeneousBiophys.xml using XSL file: NeuroMLFiles/Schemata/v1.8.1/Level3/NeuroML_Level3_v1.8.1_HTML.xsl

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Converting the file: InhomogeneousBiophys.xml

NeuroML Level 3 file

Cell: InhomogenousBiophys

As described in the NeuroML file
A cell with some inhomogenous biophysical parameters.
Total number of segments5
Total number of cables3 with 0 soma cable(s), 0 dendritic cable(s) and 0 axonal cable(s)
Cable details Soma (id:0), number of segments in cable: 1

DendSection1 (id:1), number of segments in cable: 2

DendSection2 (id:2), number of segments in cable: 2

Cable Groups
Groups of cables defined, for example, to allow easier specification of channel location
all contains 3 cables: Soma (id:0) DendSection1 (id:1) DendSection2 (id:2)
soma_group contains 1 cables: Soma (id:0)
dendrite_group contains 2 cables: DendSection1 (id:1) DendSection2 (id:2)

Biophysical properties of cell: InhomogenousBiophys

Unit system of biophysical entities
This can be either SI Units or Physiological Units
Physiological Units
Channel Mechanism: PassiveCond
An active membrane conductance

Conductance density (gmax) of 0.03 mS cm-2 on: soma_group 

Channel Mechanism: NaConductance

An active membrane conductance

Specific Capacitance
This is the capacitance per unit area of the membrane

Specific Capacitance of 1 uf/cm2 on: all 

Specific Axial Resistance
This is the specific cytoplasmic resistance along a dendrite/axon

Specific Axial Resistance of 0.11 Kohm cm on: all 

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